PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT33674
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 324aa    MW: 36361.9 Da    PI: 4.7223
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT33674genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM78.11.9e-24441821127
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee..vikevdiykvePwdLpk.....kvkaeekewyfFskrdkkya...tgkrknr.atksgyWkatgkdk 90 
               lppG+ F+Pt+ee+v+ yL+  ++g++++ +e  v+ e d+y   P  L +     +++ ++ +w+f ++ + ++     g+r  r +++ gyWk   ++k
  EMT33674  44 LPPGVYFNPTNEEIVHTYLNGWIAGHDTSGAEaaVVIEDDVYGDRPDVLARrhlsaSTRDSDPNWWFCCHCKVQAMrggAGHRGDRgVATGGYWKLEQTTK 144
               79************************9555441157778**********843454333334448877777666555344578999988899********** PP

       NAM  91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
               ev ++ +ge++g  +++ fy +++ + ekt+W+m+ey+
  EMT33674 145 EVRCEaDGEHIGFNRSFGFYVEHEGEKEKTRWLMEEYT 182
               **99889999**********9999999**********7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.68E-2737204IPR003441NAC domain
PROSITE profilePS5100528.97744209IPR003441NAC domain
PfamPF023655.9E-1545182IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MTAKKPKKEA RKLTPRSPPT NTTGVEMAPP ARDDYEYLTP TLALPPGVYF NPTNEEIVHT  60
YLNGWIAGHD TSGAEAAVVI EDDVYGDRPD VLARRHLSAS TRDSDPNWWF CCHCKVQAMR  120
GGAGHRGDRG VATGGYWKLE QTTKEVRCEA DGEHIGFNRS FGFYVEHEGE KEKTRWLMEE  180
YTNVDHPDES TARNDGRNVL PALYRIYRPE DQWQRCWGRA RRRVRGAGQE EPQGGFEAPP  240
PPPSSVFSEY RGDEAASSDD DHGMTTNESL LEETQGSTGG DDCPELRVLV TMNDHGMPAW  300
EMGMGGGYVF ADTSWIDEHY QNTE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swp_D3e-134221518174NAC domain-containing protein 19
3swp_C3e-134221518174NAC domain-containing protein 19
3swp_B3e-134221518174NAC domain-containing protein 19
3swp_A3e-134221518174NAC domain-containing protein 19
3swm_D3e-134221518174NAC domain-containing protein 19
3swm_C3e-134221518174NAC domain-containing protein 19
3swm_B3e-134221518174NAC domain-containing protein 19
3swm_A3e-134221518174NAC domain-containing protein 19
4dul_B3e-134221515171NAC domain-containing protein 19
4dul_A3e-134221515171NAC domain-containing protein 19
1ut7_B3e-134221515171NO APICAL MERISTEM PROTEIN
1ut7_A3e-134221515171NO APICAL MERISTEM PROTEIN
1ut4_B3e-134221515171NO APICAL MERISTEM PROTEIN
1ut4_A3e-134221515171NO APICAL MERISTEM PROTEIN
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLN1R4U20.0N1R4U2_AEGTA; NAC domain-containing protein 55
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP135701724
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15500.11e-14NAC domain containing protein 3